rs2755429 chr10:87656707 C>A

Sequence
gaccacccagtggtgttgcctcca[C/A]gttagagcccctaatatgatgagc
ASB in cell types
A549 (lung carcinoma) erythroid progenitors

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma) 0.22 1.06 0.893.2·10-4 2.00
erythroid progenitors n/a 2.40 1.000.04 2.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  infant head circumference,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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