rs2756368 chr6:88615926 A>C
- Sequence
catttttaagtgtacagttcagca[A/C]tgctaagtgtatgtctagaacttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 1.01 | -0.07 | 1.20 |
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Motif analysis
No data available
Genetic associations
GRASP amyotrophic lateral sclerosis (als), bipolar disorder, hdl cholesterol, partial epilepsy, resistance to kuru in aged women despite likely exposure, response to lithium treatment for bipolar disorder
GTEx eQTL Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Small_Intestine_Terminal_Ileum, Spleen, Testis