rs2758709 chr11:29771410 C>G

Sequence
cccccgcctcgctgccaccttgca[C/G]tttgatctcagactgctgtgctag
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia) J-Lat A72
ASB for transcription factors
SMCA4_HUMAN ETS1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 1.51 -0.64 2.5·10-41.00 1.00 n/a n/a
ETS1_HUMAN 1.89 0.31 0.051.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Heart_Atrial_Appendage,  Nerve_Tibial

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