rs2762462 chr9:12699776 T>C
- Sequence
tcaggatgtctgcagatgccaaaa[T/C]gtttatactctttgtgaccaggcc
- ASB in cell types
- THP-1 (acute monocytic leukemia)
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| THP-1 (acute monocytic leukemia) | 0.03 | 0.83 | 1.97 |
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Motif analysis
No data available
Genetic associations
GRASP abnormal involuntary movement scale, arthritis including non-rheumatoid, barnes akathisia rating scale, childhood acute lymphoblastic leukemia, ldl cholesterol change with statins, paternal transmission distortion, systolic blood pressure (sbp), waist hip ratio
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Brain_Substantia_nigra, Heart_Left_Ventricle, Muscle_Skeletal