rs2763212 chr6:106312983 A>G

Sequence
aagttgagagatggggtcaacaga[A/G]ggttgttgtttcaggataggaagg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NR2C1_HUMAN NCOR1_HUMAN ZEB2_HUMAN MEIS2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NR2C1_HUMAN 2.77 n/a 2.3·10-41.00 2.00 n/a No Hit
NCOR1_HUMAN 1.77 -1.40 3.2·10-41.00 2.00 n/a n/a
ZEB2_HUMAN 1.30 n/a 1.3·10-31.00 2.00 n/a No Hit
MEIS2_HUMAN 0.74 n/a 3.0·10-31.00 2.00 n/a No Hit
HDAC1_HUMAN 1.66 -3.04 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP childhood acute lymphoblastic leukemia,  neuroticism,  variant creutzfeldt-jakob disease
GTEx eQTL Nerve_Tibial

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