rs2766537 chr6:35729109 C>T
- Sequence
aggacaggcggggaggagtggttc[C/T]gggaaaggccctggcaggcagcat
- ASB in cell types
- SUM159PT (Triple negative breast cancer)
- ASB for transcription factors
- EP300_HUMAN BRD2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 1.06 | -0.10 | 1.23 | n/a | n/a | |||
| BRD2_HUMAN | 1.90 | -0.83 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Skin_Sun_Exposed_Lower_leg, Thyroid