rs2766556 chr6:35757545 G>A

Sequence
cctacatggtaaggaacccgggaa[G/A]gacccaggccaacagactctgcag
ASB in cell types
GM18526 (B – cells Lymphoblastoid Cell Lines) GM12890 (Lymphoblastoid Cell Lines)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM18526 (B – cells Lymphoblastoid Cell Lines) 2.27 0.68 0.021.00 1.00
GM12890 (Lymphoblastoid Cell Lines) 0.14 1.44 1.000.03 1.00
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Motif analysis

No data available

Genetic associations

GRASP college completion,  fasting blood glucose,  homa-ir,  ldl cholesterol,  ldl cholesterol change with statins,  rheumatoid arthritis,  total cholesterol,  years of education
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24,  Pancreas

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