rs2768429 chr10:12482349 C>T

Sequence
tggagctgggtggagatgtagggc[C/T]acttaggggacctccaggtcagcg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.45 -1.74 2.3·10-41.00 1.00 n/a n/a
IKZF1_HUMAN 1.98 -1.25 1.0·10-21.00 1.25 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP late onset alzheimers disease,  resistance to kuru in aged women despite likely exposure

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