rs2769256 chr1:40782816 C>T
- Sequence
ctaaaggagagggactgcccccta[C/T]agccagagagatggaggtcgggga
- ASB in cell types
- GM23338 GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.47 | 0.04 | 1.33 | -2.32 | Concordant |
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Motif analysis
