rs2770417 chr14:47917461 T>A

Sequence
gatacacactaaattttcagaatc[T/A]ttgccttacttccctcgaagtaaa
ASB in cell types
foreskin keratinocyte gastroesophageal sphincter

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte n/a 1.20 1.003.9·10-3 2.00
gastroesophageal sphincter 2.31 0.62 0.041.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP barnes akathisia rating scale,  depression scale of the revised neo personality inventory,  lp-pla2 activity,  major depressive disorder
GTEx eQTL Artery_Aorta,  Thyroid

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