rs2770558 chr5:70401105 G>A
- Sequence
tccgggtgggcgcgggctcggcgc[G/A]acttccgggtgggcgcgggctcgg
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP C4-2B (prostate carcinoma) GM12892 (female B-cells lymphoblastoid cell line) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN CDK9_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.34 | 2.20 | 1.17 | n/a | n/a | |||
| CTCF_HUMAN | 1.44 | 1.65 | 1.49 | n/a | No Hit | |||
| CDK9_HUMAN | -1.08 | 1.72 | 1.00 | n/a | n/a |
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