rs2771342 chr14:20988889 C>T

Sequence
gtagagaaccacagaaggaaagtc[C/T]aattagggcgctggggcctgagat
ASB in cell types
MDM(monocyte derived macrophages) monocyte-derived dendritic cells
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.02 -0.34 3.5·10-51.00 1.83 -0.62 Weak Concordant
Items per page:
1 – 1 of 1

Motif analysis

SPI1_HUMAN Weak Concordant
SPI1_HUMAN pic

Genetic associations

GRASP chronic kidney disease,  postoperative nausea and vomiting,  triglycerides change with statins
GTEx eQTL Esophagus_Mucosa,  Heart_Left_Ventricle,  Muscle_Skeletal,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Stomach,  Testis,  Whole_Blood

Download