rs2771343 chr14:20988936 T>C
- Sequence
atcatcaggccctagcctgatgac[T/C]caggagtctagccctccagatgaa
- ASB in cell types
- BEAS-2B (bronchial epithelium) CD14+ monocytes
- ASB for transcription factors
- GCR_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 2.13 | n/a | 1.00 | n/a | No Hit | |||
| STAT1_HUMAN | 1.51 | -0.99 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Esophagus_Mucosa, Heart_Left_Ventricle, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood