rs2771425 chr6:158475744 A>G
- Sequence
ggaaattgatgactgtgaggtggc[A/G]aaatcaggactagcgttagtgaac
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- PBX2_HUMAN MEIS2_HUMAN PKNX1_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PBX2_HUMAN | -3.30 | 3.46 | 1.00 | n/a | No Hit | |||
| MEIS2_HUMAN | -1.93 | 2.29 | 1.00 | n/a | No Hit | |||
| PKNX1_HUMAN | 0.04 | 2.50 | 1.00 | n/a | No Hit | |||
| MNT_HUMAN | -0.69 | 2.17 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4