rs2771994 chr9:132849514 T>C
- Sequence
catgtgtccacccccgatttagaa[T/C]agcctctgggctctggatatctgc
- ASB in cell types
- sigmoid colon
- ASB for transcription factors
- EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 0.15 | 2.06 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP age at death with kuru exposure, aspirin-exacerbated respiratory disease, bipolar disorder, chronic kidney disease, hdl cholesterol, percent decrease of forced expiratory volume (fev) for 1 month after aspirin challenge, schizophrenia, serum creatinine
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Tibial, Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Substantia_nigra, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid