rs2774230 chr6:160256582 G>C
- Sequence
agtgttctccaaacctttgggatt[G/C]tttaaattccaccacaggtgattc
- ASB in cell types
- keratinocytes MCF10A (breast epithelial cells)
- ASB for transcription factors
- SNAI2_HUMAN TEAD4_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | -1.12 | 1.81 | 1.50 | n/a | No Hit | |||
| TEAD4_HUMAN | -2.53 | 2.93 | 1.00 | 3.86 | Concordant |
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Motif analysis
