rs2777744 chr9:33473895 T>G
- Sequence
tcagattctagccgggtctatacc[T/G]catagcttcccacgtgggcggaaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) hMADS-3 (adipose-derived stem cells) adult erythroblasts
- ASB for transcription factors
- HCFC1_HUMAN FOXK2_HUMAN KLF11_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HCFC1_HUMAN | n/a | 1.89 | 2.25 | n/a | n/a | |||
| FOXK2_HUMAN | -0.29 | 2.74 | 1.50 | n/a | No Hit | |||
| KLF11_HUMAN | 1.88 | -0.24 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Whole_Blood