ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs277866
chr5:100757840
C
>
A
Sequence
gtgctgtcagtgtcaagattagat[C/A]agacaccatggggattccttttca
ASB in cell types
WA09 (embryonic stem cells)
ASB for transcription factors
NANOG_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NANOG_HUMAN
1.67
-0.88
0.02
1.00
1.22
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Nerve_Tibial
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)