rs2779485 chr1:16605635 G>C
- Sequence
gagaaaaaaagataaataataatg[G/C]ttccaagaaatgcacagcagacag
- ASB in cell types
- HEK293 (embryonic kidney) liver iPSC (induced pluripotent stem cells) CD4+ T cells from blood
- ASB for transcription factors
- RXRA_HUMAN TF65_HUMAN DUX4_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RXRA_HUMAN | 2.81 | n/a | 1.50 | n/a | No Hit | |||
| TF65_HUMAN | 2.06 | n/a | 1.00 | n/a | No Hit | |||
| DUX4_HUMAN | 2.33 | -1.93 | 1.00 | n/a | No Hit |
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