rs2780869 chr1:56461446 C>T
- Sequence
acctaaacatcccagcattcctag[C/T]gggaagaggcagagcgcaggaggc
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- ZBT26_HUMAN GATD1_HUMAN EP300_HUMAN MAX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT26_HUMAN | 2.98 | n/a | 1.00 | n/a | No Hit | |||
| GATD1_HUMAN | 2.67 | -2.34 | 1.00 | n/a | n/a | |||
| EP300_HUMAN | 2.51 | -2.35 | 1.00 | n/a | n/a | |||
| MAX_HUMAN | 2.06 | -0.21 | 1.17 | n/a | No Hit | |||
| ZN792_HUMAN | 2.71 | -2.78 | 1.00 | n/a | n/a |
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