rs2781370 chr14:65224946 T>C

Sequence
gaaggaaggaggcctttctttctc[T/C]ctcaccatgctgttccctctgggg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) Th1-cells
ASB for transcription factors
IKZF2_HUMAN TBX21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.03 -1.47 4.9·10-31.00 1.00 n/a n/a
TBX21_HUMAN 2.49 0.54 0.011.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts

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