rs2783670 chr1:26128691 A>G
- Sequence
aaagtcaaggctgcagtgagctgg[A/G]atcaccacgctgcactccaccctg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- AFF1_HUMAN ZFP91_HUMAN ZBT40_HUMAN KAISO_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AFF1_HUMAN | 2.03 | -1.02 | 1.00 | n/a | n/a | |||
| ZFP91_HUMAN | 2.55 | -2.29 | 1.00 | n/a | No Hit | |||
| ZBT40_HUMAN | 1.41 | -0.94 | 1.00 | n/a | No Hit | |||
| KAISO_HUMAN | 2.17 | n/a | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Putamen_basal_ganglia, Brain_Substantia_nigra, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid