rs2786712 chr13:44720433 A>G

Sequence
atttccccaaatagaaaatagtac[A/G]gtttgtaagtggcagaatcagtct
ASB in cell types
HASM2 (Human airway smooth muscle 2) HEK293-A
ASB for transcription factors
GCR_HUMAN MEF2B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 1.70 0.00 6.6·10-51.00 1.00 -2.19 Concordant
MEF2B_HUMAN -0.27 2.36 0.900.02 3.00 n/a No Hit
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Motif analysis

GCR_HUMAN Concordant
GCR_HUMAN pic

Genetic associations

GRASP aortic valve calcium,  eye color
GTEx eQTL Lung,  Skin_Sun_Exposed_Lower_leg

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