rs2789334 chr1:18773942 A>G
- Sequence
ctgttcttggctgtcacttctttt[A/G]agtgacagcttcccaaggaaagcg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MEIS2_HUMAN PBX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEIS2_HUMAN | -3.70 | 4.01 | 1.00 | 4.38 | Concordant | |||
| PBX2_HUMAN | -4.52 | 3.13 | 1.33 | 6.73 | Concordant |
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Motif analysis
