rs2790428 chr1:53107648 G>C
- Sequence
gagctggagagactgcgtgaccaa[G/C]cactaccatcctaaatctactaag
- ASB in cell types
- 22RV1 (prostate carcinoma) MCF7 WS8 cells MCF7 (Invasive ductal breast carcinoma) breast tumor
- ASB for transcription factors
- ANDR_HUMAN AHR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.47 | 2.62 | 1.80 | n/a | No Hit | |||
| AHR_HUMAN | 1.98 | 0.16 | 2.00 | n/a | No Hit |
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