rs2792434 chr7:151232390 T>G
- Sequence
cccagccgaggaggtgcgcggtgc[T/G]gagaggccgtgggagcgaccatag
- ASB in cell types
- CD14+ monocytes MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- STAT1_HUMAN RBBP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.50 | -3.30 | 2.00 | n/a | No Hit | |||
| RBBP5_HUMAN | 2.04 | -0.98 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Lung, Pancreas, Pituitary, Spleen, Stomach, Testis, Thyroid, Whole_Blood