rs2793109 chr10:31090917 T>A
- Sequence
accttgttagaaaacagcttggaa[T/A]ccacaaagtttgggtgcagctgac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MOLT-4 (Adult T acute lymphoblastic leukemia) Jurkat (T-cells) ICN12 (primary pre-B acute lymphomablastic leukemia)
- ASB for transcription factors
- CDK9_HUMAN BRD4_HUMAN SKIL_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK9_HUMAN | -2.84 | 3.33 | 1.00 | n/a | n/a | |||
| BRD4_HUMAN | -2.24 | 4.05 | 1.00 | n/a | n/a | |||
| SKIL_HUMAN | -3.95 | 3.63 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | -3.41 | 3.30 | 1.00 | n/a | n/a | |||
| KDM6A_HUMAN | -4.79 | 2.99 | 1.50 | n/a | n/a |
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