rs2793760 chr13:99614621 C>T
- Sequence
ctcagctgtgccgtgcctgctgaa[C/T]ggcctcaccttggcctctggctct
- ASB in cell types
- MS-1 (Small cell lung carcinoma) GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.82 | -1.68 | 1.22 | n/a | n/a | |||
| CTCF_HUMAN | 0.73 | 0.43 | 1.25 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Heart_Left_Ventricle, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg