ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs2794278
chr1:21598615
T
>
C
Sequence
ttccacaaccccccacccgtaccc[T/C]ctgcgaggaggacgggcctagcca
ASB for transcription factors
ZIC2_HUMAN
GLIS2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZIC2_HUMAN
n/a
3.69
1.00
7.3·10
-5
2.00
2.54
Concordant
GLIS2_HUMAN
-1.94
2.72
1.00
0.04
2.00
7.36
Concordant
Items per page:
5
1 – 2 of 2
Motif analysis
ZIC2_HUMAN
Concordant
Show reverse complement
Show rev. comp.
Download SVG
GLIS2_HUMAN
Concordant
Genetic associations
GRASP
cystatin c in serum
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
Click for anchor link
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
Go to motif analysis