rs2796077 chr1:242431566 A>G
- Sequence
gatcctgctatatttctcatccac[A/G]gcttatttacacatcttcttttaa
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.92 | 2.25 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP asthma, ldl cholesterol change with statins, refractive error, total cholesterol, total cholesterol change with statins