rs2797347 chr9:121640293 T>C
- Sequence
agtgcggatctagaaagagctcac[T/C]gttccggagaggtaggtgtgggcc
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) GM19240 (B cells Lymphoblastoid Cell Lines) GBM39 (Human brain tumor)
- ASB for transcription factors
- STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.80 | -0.18 | 1.10 | n/a | n/a |
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