rs2797687 chr1:7784383 G>T

Sequence
caagggcgggggcagcaggtgagt[G/T]cgcggccgggcgggagttctgggc
ASB in cell types
keratinocytes 22RV1 (prostate carcinoma)
ASB for transcription factors
SNAI2_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN n/a 3.37 1.003.5·10-6 1.50 n/a No Hit
ANDR_HUMAN 1.75 -0.90 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Lung,  Muscle_Skeletal,  Whole_Blood

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