rs2798353 chr1:47175369 A>G

Sequence
aagagctgagggtgagatgtagta[A/G]aagatgtcagggagacgccccgaa
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.50 0.05 0.021.00 1.00 n/a n/a
RAD21_HUMAN 1.32 -0.41 0.040.98 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  ldl cholesterol
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Esophagus_Mucosa,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg

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