rs2798601 chr1:154807209 A>G
- Sequence
gccgaggacatacagagaaggtga[A/G]acaaggtggttttggtgaagctga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -3.92 | 3.60 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP ldl cholesterol, tardive dyskinesia, total cholesterol, ventricular dysfunction after primary coronary artery bypass graft (cabg) surgery