rs2798732 chr9:15373130 T>C
- Sequence
ttgtttctttgtgtgtttgctttt[T/C]gcaagcctgtgaatttgtattaat
- ASB in cell types
- ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.70 | 1.87 | 2.00 | 0.10 | Weak Concordant | |||
| FOXA2_HUMAN | -3.21 | 1.93 | 1.33 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, hdl cholesterol, homa-b, rheumatoid arthritis