rs27988 chr5:157253675 A>G
- Sequence
cagagggcagcattgtgttggtca[A/G]tgttcccttggcgagcaattgaaa
- ASB in cell types
- glioblastoma cells epithelial cell of prostate THP-1 (acute monocytic leukemia) CD14+ monocytes
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.40 | 0.82 | 1.70 | n/a | No Hit | |||
| STAT1_HUMAN | -1.54 | 2.49 | 2.00 | n/a | No Hit |
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