rs2800859 chr1:222009246 A>G
- Sequence
gttcctaaagccacaggtgttctc[A/G]tctattctagagaaactgcaggag
- ASB in cell types
- A549 (lung carcinoma) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -0.00 | 1.68 | 1.77 | n/a | n/a | |||
| RAD21_HUMAN | 0.31 | 1.45 | 1.88 | n/a | n/a |
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