rs2800881 chr1:111591288 C>T
- Sequence
ttttcaaagaaccagctttttgtt[C/T]tcctgatcctttctatcataactt
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.50 | 0.88 | 1.02 |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), chronic kidney disease, college completion, comorbid depressive syndrome and alcohol dependence, hdl cholesterol, ldl cholesterol, triglycerides
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood