rs2801194 chr1:208252570 A>C
- Sequence
tgtggtctctccaggacatcaccc[A/C]cccctggtggaatgacagggaagt
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | -1.29 | 2.19 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | -0.11 | 1.93 | 1.79 | 3.40 | Concordant |
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Motif analysis
