rs2802025 chr1:89912532 G>A

Sequence
cttccttgtttacctgcctctata[G/A]aactccagaccctttccttttctt
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN -4.09 2.25 1.000.02 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Esophagus_Mucosa,  Muscle_Skeletal

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