rs2803881 chr1:162873816 A>C
- Sequence
actaattttttgagttgggaaaac[A/C]atagtcgacacggtgtaccatgct
- ASB in cell types
- LNCaP (prostate carcinoma) BEAS-2B (bronchial epithelium) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.36 | 0.26 | 1.72 | -3.38 | Concordant | |||
| GCR_HUMAN | 1.67 | 0.64 | 3.67 | n/a | No Hit |
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Motif analysis
