rs2804121 chr10:6917150 A>G
- Sequence
ctaaaagagctacaatttccacaa[A/G]tggagcagaagacaatagtcactt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 2.42 | 0.51 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, ldl cholesterol, microalbuminuria, spine bone mineral density (bmd), sporadic creutzfeldt-jakob disease, waist hip ratio