rs2804780 chr1:234781937 C>G
- Sequence
gtgttggacagaacatggtctttg[C/G]agccagacaaatcttgatttagta
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZBT40_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT40_HUMAN | n/a | 3.21 | 1.00 | n/a | No Hit | |||
| CTCF_HUMAN | -0.44 | 1.31 | 1.31 | n/a | No Hit |
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