rs2804925 chr6:13574703 C>T
- Sequence
agcctggaaggcgctccgggggta[C/T]ccagagctcttagcgggccggcag
- ASB in cell types
- 22RV1 (prostate carcinoma) breast tumor HCC1806(Squamous cell breast carcinoma, acantholytic variant) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ANDR_HUMAN CDN1B_HUMAN GCR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.73 | 0.10 | 1.83 | n/a | No Hit | |||
| CDN1B_HUMAN | 0.52 | 1.63 | 1.00 | n/a | n/a | |||
| GCR_HUMAN | 0.70 | 1.09 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Nerve_Tibial, Ovary, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid