rs2805921 chr10:69087793 G>A
- Sequence
gattcttaatattagcaatctagt[G/A]tttagattgttacctgaagaaagg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) adult erythroblasts
- ASB for transcription factors
- FOXK2_HUMAN RBBP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | n/a | 3.14 | 3.00 | -2.82 | Discordant | |||
| RBBP5_HUMAN | 2.04 | -0.98 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Muscularis, Lung, Muscle_Skeletal, Thyroid, Whole_Blood