rs2807946 chr1:87131774 T>G

Sequence
gacgtctggggggctttttgcctg[T/G]tggaagggcatcactcgtccacag
ASB in cell types
LUHMES (lund human mesencephalic cells)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LUHMES (lund human mesencephalic cells) -0.56 1.91 1.000.02 1.00
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Motif analysis

No data available

Genetic associations

GRASP autism
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Frontal_Cortex_BA9,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Brain_Spinal_cord_cervical_c-1,  Colon_Sigmoid,  Esophagus_Mucosa

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