rs2808066 chr10:31760151 C>T
- Sequence
gctgagggggccctgactccgcct[C/T]gcagcccgggcttcggggtggggc
- ASB in cell types
- breast tumor
- ASB for transcription factors
- RBM25_HUMAN VEZF1_HUMAN SPI1_HUMAN NFAC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | 1.43 | -1.59 | 5.00 | n/a | n/a | |||
| VEZF1_HUMAN | -1.28 | 2.34 | 2.00 | -0.18 | Weak Discordant | |||
| SPI1_HUMAN | -0.30 | 1.44 | 1.50 | n/a | No Hit | |||
| NFAC3_HUMAN | 2.33 | -2.17 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
