rs2811258 chr1:178692779 C>T

Sequence
cacttcctcttgagtagggtggca[C/T]tggagtatctcacaggcattttgg
ASB in cell types
THP-1 (acute monocytic leukemia)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
THP-1 (acute monocytic leukemia) 2.16 0.64 2.1·10-31.00 2.50
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Motif analysis

No data available

Genetic associations

GRASP age at death with kuru exposure,  comorbid depressive syndrome and alcohol dependence,  fasting blood glucose,  ldl cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Muscle_Skeletal,  Testis

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