rs2817421 chr6:50849364 C>G

Sequence
ccggcccctttgttacagtgttag[C/G]aggctgtagagggagtaaggaaag
ASB in cell types
GM23338 MEL1 (Mucosal melanoma)
ASB for transcription factors
EZH2_HUMAN AHR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EZH2_HUMAN 1.46 -0.38 1.1·10-31.00 1.00 n/a n/a
AHR_HUMAN 2.37 -4.60 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  ldl cholesterol change with statins,  obesity with early age of onset (age >2)
GTEx eQTL Brain_Cerebellum,  Colon_Sigmoid

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