rs2819590 chr3:4467058 C>T

Sequence
gagtatcggtgagcggctgccgaa[C/T]tgccatgggcgccaggccgctggg
ASB in cell types
HEK293 (embryonic kidney) SUM159PT (Triple negative breast cancer)
ASB for transcription factors
BRD2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD2_HUMAN 0.68 2.13 1.009.9·10-5 1.14 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  ldl cholesterol,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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